R2-05-综合应用举例

Adobe Freeman 2018-01-09 23:57:37 阅读: 1198

library("ggplot2")
R1_data <- read.csv(file = "/Users/Adobe/Desktop/D/R/phase2/R2-1/data/R2-1-1.csv",header = T)
head(R1_data) #查看数据的前几列
str(R1_data)
R1_data <- na.omit(R1_data)
p <- ggplot(R1_data,aes(x = A ,y = B ,color = SIZE)) +
  geom_line(shape = 2) +  
  labs(x = "A gene expression" ,y = "B gene expression",
       title = "R2-05",caption = "It's really my work ,see my name,hahahahah") +
  xlim(-2,3) +
  ylim(-1,3) 
print(p)

part2

library(ggplot2)
data<-ggplot(midwest,aes(x=area,y=poptotal))+
  geom_point(aes(col=state,size=popdensity))+
  geom_smooth(method='loess')+xlim(c(0,0.1))+ylim(c(0,500000))+
  labs(title="R2-05-Adobe")
mytheme<- theme(panel.grid = element_blank(),
                panel.background=element_blank(),
                axis.text=element_blank(),
                axis.ticks = element_blank()) +
                theme(legend.position = "Right")
 data + mytheme

part3

library(reshape2)
library(scales)
library(plyr)
library(ggplot2)
data<-read.csv(file.choose())
data2<-melt(data,id.vars=c("Name"))
data3<-ddply(data2,.(variable), transform,label=rescale(value))
ggplot(data3, aes(x=variable,y=Name)) + 
  geom_tile(aes(fill=label)) + 
  scale_fill_gradient(low = "pink", high = "red") + 
  xlab("Groups") +
  ggtitle("R2-05-Adobe")

屏幕截图_2018-01-09_23_53_35.png